BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C11SP1|AL428197
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1451 543 e-154
>3x_Contig1451
Length = 8346
Score = 543 bits (273), Expect = e-154
Identities = 273/273 (100%)
Strand = Plus / Plus
Query: 1 atcacatttagcggtcaagttcaaaacatcaccgtctcgtctagcagtgacaacatattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8055 atcacatttagcggtcaagttcaaaacatcaccgtctcgtctagcagtgacaacatattc 8114
Query: 61 gaaattgaaaccaatagcatcacagaaggcacggtacatttgtagcacagtggtaccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8115 gaaattgaaaccaatagcatcacagaaggcacggtacatttgtagcacagtggtaccatg 8174
Query: 121 accggtacctagattccattccctgcaagtaccagcgtatttttccagatattttagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8175 accggtacctagattccattccctgcaagtaccagcgtatttttccagatattttagtgc 8234
Query: 181 tgctagatgaccctttgccaaatcgacaacgtggatatagtctctaattggcgtaccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8235 tgctagatgaccctttgccaaatcgacaacgtggatatagtctctaattggcgtaccatc 8294
Query: 241 gacggaatcgtaatcgtcaccaaagacgtatag 273
|||||||||||||||||||||||||||||||||
Sbjct: 8295 gacggaatcgtaatcgtcaccaaagacgtatag 8327
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,262
Number of Sequences: 1807
Number of extensions: 16262
Number of successful extensions: 2238
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)